TRMT1 (tRNA (guanine(26)-N(2))-dimethyltransferase)
FEATURES
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DESCRIPTION
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EXTERNAL LINKS
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Germline Genetics

Summary of germline evidence for TRMT1 and cancer

  • Ensembl Gene ID: ENSG00000104907
  • Ensembl Transcript ID/s: ENST00000221504; ENST00000357720; ENST00000437766; ENST00000592062
  • Entrez Gene ID: 55621
  • HGNC Gene Symbol: TRMT1

Genome-wide association studies

TRMT1 maps to cancer-SNP associations according to the following annotations:

SNPLocusPosition (b37)Risk alleleRAFP-valueEffect sizeCICancerPMIDCatalogTADLSDEPICT
2471_rs11173003019p13.1313268826rs111730030-T0.04842E-80.0837[0.054-0.113] unit increaseBreast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs11173003019:13140000-14220000r2>0.9 (19:13222513-13271384)-
2050_rs11173003019p13.1313268826rs111730030-T0.04842E-80.0837[0.054-0.113] unit increaseBreast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs11173003019:13140000-14220000r2>0.9 (19:13222513-13271384)-
2436_rs7826969219p13.1313158277rs78269692-T0.052E-91.09[1.04-1.13] (Oncoarray)Breast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs7826969219:13140000-14220000r2>0.4 (19:12780549-13268826)-
2015_rs7826969219p13.1313158277rs78269692-T0.052E-91.09[1.04-1.13] (Oncoarray)Breast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs7826969219:13140000-14220000r2>0.4 (19:12780549-13268826)-
2396_rs259471419p13.1213954571rs2594714-A0.771E-81.0309278[1.01-1.05] (Oncoarray)Breast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs259471419:13140000-14220000--
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