SLC27A1 (Long-chain fatty acid transport protein 1)
FEATURES
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DESCRIPTION
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EXTERNAL LINKS
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Germline Genetics

Summary of germline evidence for SLC27A1 and cancer

  • Ensembl Gene ID: ENSG00000130304
  • Ensembl Transcript ID/s: ENST00000252595; ENST00000598424
  • Entrez Gene ID: 376497
  • HGNC Gene Symbol: SLC27A1

Genome-wide association studies

SLC27A1 maps to cancer-SNP associations according to the following annotations:

SNPLocusPosition (b37)Risk alleleRAFP-valueEffect sizeCICancerPMIDCatalogTADLSDEPICT
753_rs6739720019p13.1117401404rs67397200-G0.32E-81.03[1.01-1.05] (Oncoarray)Breast cancer29059683https://www.ebi.ac.uk/gwas/search?query=rs67397200-r2>0.9 (19:16903254-17896799)-
2654_rs6739720019p13.1117401404rs67397200-G0.323E-171.18[1.14-1.23]Breast Cancer in BRCA1 mutation carriers29058716https://www.ebi.ac.uk/gwas/search?query=rs67397200-r2>0.9 (19:16903254-17896799)-
2233_rs6739720019p13.1117401404rs67397200-G0.323E-171.18[1.14-1.23]Breast Cancer in BRCA1 mutation carriers29058716https://www.ebi.ac.uk/gwas/search?query=rs67397200-r2>0.9 (19:16903254-17896799)-
2268_rs6739720019p13.1117401404rs67397200-G0.323E-371.17[1.14-1.19]Breast cancer (estrogen-receptor negative)29058716https://www.ebi.ac.uk/gwas/search?query=rs67397200-r2>0.9 (19:16903254-17896799)-
2689_rs6739720019p13.1117401404rs67397200-G0.323E-371.17[1.14-1.19]Breast cancer (estrogen-receptor negative)29058716https://www.ebi.ac.uk/gwas/search?query=rs67397200-r2>0.9 (19:16903254-17896799)-
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